PacBio Revio System
Laboratorie- og analyseutstyr
Aalborg Universitet has entered into an agreement with PacBio for the delivery of a PacBio Revio System to Nordjylland for a duration of 2 years. The system is required to sequence genomic regions not covered by short-read technologies, generate long reads up to 25,999 bases with an error rate under 1% for individual molecules and an average error rate under 0.1% across the dataset, and provide direct DNA methylation information without bisulfite conversion. The raw data must be compatible with existing PacBio Revio® system data to integrate with current bioinformatic pipelines and serve as a seamless backup.
Result
- Winner
- PacBio
- Number of bids
- 0
- Contract value
- €685,000
About the bid
- Contact name
- Alexander Herskind Rasmussen
- Contact phone
- 22505186
- Contact email
- ahra@adm.aau.dk
- Address
- Fredrik Bajers Vej 7K, 9220 Aalborg Øst
We require an instrument that can: * sequence regions of the genome that cannot be adequately covered using short-read sequencing technologies; * generate long reads of up to 25,999 bases with an error rate of less than 1% for individual molecules and an average error rate of less than 0.1% across the entire dataset; * provide direct information on DNA methylation without the need for bisulfite conversion or other enzymatic manipulations. These requirements are essential for whole human genome sequencing with a data quality that enables reliable detection og single-base variants, structural variants, and difficult-to-sequence genomic regions, such as those containing pseudogenes or repetitive sequences, while simultaneously providing haplotype phasing information and DNA methylation status. Raw data should be compatible with data from out existing Long-Read sequencer (PacBio Revio® system) enabling the use of our existing bioinformatic pipelines, and the instrument should be able to serve as a seamless back-up. The PacBio Revio® System is currently the only instrument that meets these requirements.
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See the full notice
- Contracting authority
- Aalborg Universitet
- Title
- PacBio Revio System
- Type
- Main code
- Supplemental codes
- Location
- Nordjylland
- Duration
- 2 years